Store Output of Subprocess.Popen Call in a String

Store output of subprocess.Popen call in a string

In Python 2.7 or Python 3

Instead of making a Popen object directly, you can use the subprocess.check_output() function to store output of a command in a string:

from subprocess import check_output
out = check_output(["ntpq", "-p"])

In Python 2.4-2.6

Use the communicate method.

import subprocess
p = subprocess.Popen(["ntpq", "-p"], stdout=subprocess.PIPE)
out, err = p.communicate()

out is what you want.

Important note about the other answers

Note how I passed in the command. The "ntpq -p" example brings up another matter. Since Popen does not invoke the shell, you would use a list of the command and options—["ntpq", "-p"].

Can I have subprocess.call write the output of the call to a string?

No, you can't read the output of subprocess.call() directly into a string.

In order to read the output of a command into a string, you need to use subprocess.Popen(), e.g.:

>>> cmd = subprocess.Popen('ls', stdout=subprocess.PIPE)
>>> cmd_out, cmd_err = cmd.communicate()

cmd_out will have the string with the output of the command.

Retrieving the output of subprocess.call()

Output from subprocess.call() should only be redirected to files.

You should use subprocess.Popen() instead. Then you can pass subprocess.PIPE for the stderr, stdout, and/or stdin parameters and read from the pipes by using the communicate() method:

from subprocess import Popen, PIPE

p = Popen(['program', 'arg1'], stdin=PIPE, stdout=PIPE, stderr=PIPE)
output, err = p.communicate(b"input data that is passed to subprocess' stdin")
rc = p.returncode

The reasoning is that the file-like object used by subprocess.call() must have a real file descriptor, and thus implement the fileno() method. Just using any file-like object won't do the trick.

See here for more info.

Store the output of Subprocess.call in a String

x=subprocess.Popen("grep 'xyz-pqr' textfile_5906.txt",shell=True,stdout=subprocess.PIPE,stderr=subprocess.PIPE)
output,err=x.communicate()

This way you can have error and output.

How to save a subprocess output as a list of strings for further analysis?

I think you can do what you want by adding the following line before printing the output:

output = output.decode().splitlines()

Calling decode() will turn the bytes into a python string (str), and the splitlines() turns that into a list-of-strings.

decode() is bytes method that decodes them into a string assuming they've been encoded in utf-8 (by default) — it's not documented in the subprocessing documentation (that I know of).

Pipe subprocess standard output to a variable

To get the output of ls, use stdout=subprocess.PIPE.

>>> proc = subprocess.Popen('ls', stdout=subprocess.PIPE)
>>> output = proc.stdout.read()
>>> print output
bar
baz
foo

The command cdrecord --help outputs to stderr, so you need to pipe that indstead. You should also break up the command into a list of tokens as I've done below, or the alternative is to pass the shell=True argument but this fires up a fully-blown shell which can be dangerous if you don't control the contents of the command string.

>>> proc = subprocess.Popen(['cdrecord', '--help'], stderr=subprocess.PIPE)
>>> output = proc.stderr.read()
>>> print output
Usage: wodim [options] track1...trackn
Options:
    -version    print version information and exit
    dev=target  SCSI target to use as CD/DVD-Recorder
    gracetime=# set the grace time before starting to write to #.
...

If you have a command that outputs to both stdout and stderr and you want to merge them, you can do that by piping stderr to stdout and then catching stdout.

subprocess.Popen(cmd, stdout=subprocess.PIPE, stderr=subprocess.STDOUT)

As mentioned by Chris Morgan, you should be using proc.communicate() instead of proc.read().

>>> proc = subprocess.Popen(['cdrecord', '--help'], stdout=subprocess.PIPE, stderr=subprocess.PIPE)
>>> out, err = proc.communicate()
>>> print 'stdout:', out
stdout: 
>>> print 'stderr:', err
stderr:Usage: wodim [options] track1...trackn
Options:
    -version    print version information and exit
    dev=target  SCSI target to use as CD/DVD-Recorder
    gracetime=# set the grace time before starting to write to #.
...

live output from subprocess command

TLDR for Python 3:

import subprocess
import sys

with open("test.log", "wb") as f:
    process = subprocess.Popen(your_command, stdout=subprocess.PIPE)
    for c in iter(lambda: process.stdout.read(1), b""):
        sys.stdout.buffer.write(c)
        f.buffer.write(c)

---

You have two ways of doing this, either by creating an iterator from the read or readline functions and do:

import subprocess
import sys

# replace "w" with "wb" for Python 3
with open("test.log", "w") as f:
    process = subprocess.Popen(your_command, stdout=subprocess.PIPE)
    # replace "" with b'' for Python 3
    for c in iter(lambda: process.stdout.read(1), ""):
        sys.stdout.write(c)
        f.write(c)

or

import subprocess
import sys

# replace "w" with "wb" for Python 3
with open("test.log", "w") as f:
    process = subprocess.Popen(your_command, stdout=subprocess.PIPE)
    # replace "" with b"" for Python 3
    for line in iter(process.stdout.readline, ""):
        sys.stdout.write(line)
        f.write(line)

Or you can create a reader and a writer file. Pass the writer to the Popen and read from the reader

import io
import time
import subprocess
import sys

filename = "test.log"
with io.open(filename, "wb") as writer, io.open(filename, "rb", 1) as reader:
    process = subprocess.Popen(command, stdout=writer)
    while process.poll() is None:
        sys.stdout.write(reader.read())
        time.sleep(0.5)
    # Read the remaining
    sys.stdout.write(reader.read())

This way you will have the data written in the test.log as well as on the standard output.

The only advantage of the file approach is that your code doesn't block. So you can do whatever you want in the meantime and read whenever you want from the reader in a non-blocking way. When you use PIPE, read and readline functions will block until either one character is written to the pipe or a line is written to the pipe respectively.

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